Stool microbial profile

The Stool Microbial Profile includes comprehensive bacteriology and yeast cultures to identify the presence of beneficial flora, imbalanced flora including Clostridium species, and dysbiotic flora, as well as detection of infectious pathogens. A good balance of beneficial microflora has been known to be associated with health benefits for over 100 years. At that time Metchnikoff (Nobel prize winner) drew attention to the adverse effects of dysbiotic gut microflora on the host and suggested that ingestion of fermented milks ameliorated what he called “autointoxication”. He proposed that the consumption of large quantities of Lactobacillus species would reduce the number of toxin-producing bacteria and result in better health and increased lifespan.

Over the past 90-plus years there has been extensive scientific research demonstrating that a good balance of Lactobacilli, Bifidobacteria and beneficial E. coli bacteria are important to the functional health of the gut, and as a consequence, to the whole organism. The benefits identified include inhibition of microbial pathogens, prevention and treatment of antibiotic-associated diarrhea, reduction of lactose intolerance symptoms, reduction in serum cholesterol levels, enhancement of the immune system, and the inhibition of Candida albicans. Research has shown that improved biological value of food can be achieved through the activity of Lactobacilli and Bifidobacteria which have been reported to produce folic acid, niacin, thiamin, riboflavin, pyrodoxine, biotin and vitamin K.

The mechanisms by which these benefits are derived are not yet fully understood. However, research suggests that some of the beneficial effects may be due to the following activities of beneficial bacteria:

  • release of substances antagonistic to enteropathogenic microorganisms such as lactocidin, lactobicillin and acidolin
  • competition with pathogens for adhesion receptors
  • producton of lactase
  • and production of short chain fatty acids (SCFAs) such as butyrate, proprionate and acetate

In a healthy balanced state of intestinal flora, the beneficial bacteria make up a significant proportion of the total microflora. However, in many individuals we see an imbalance of beneficial bacteria and an overgrowth of non-beneficial or even pathogenic microorganisms- dysbiosis. This can be due to a variety of factors including: daily exposure to chemicals in our drinking water that are toxic to friendly bacteria, the use of antibiotics, chronic consumption of highly processed foods (low in fiber, high in sugar) and high stress levels.

Patients may present with chronic symptoms such as irritable bowel syndrome, autoimmune diseases such as rheumatoid arthritis, fatigue, chronic headaches and allergies to a variety of foods.

Antimicrobial susceptibility testing to prescription and natural agents is also performed for appropriate bacterial species. This provides the clinician with important and specific information to help plan an appropriate treatment protocol.

Infection with yeast species can cause a variety of symptoms, both intra- and extra-gastrointestinal, and in many cases, may escape suspicion as a pathogenic agent. Controversy remains as to the relationship between Candida infection and episodes of recurrent diarrhea. However, episodes of yeast infection after short-term and long-term antibiotic use have been identified in patients with both gastrointestinal and vaginal symptoms. There is some evidence linking yeast with more chronic extra-gastrointestinal conditions. Studies suggest that the production of antibodies against Candida albicans may contribute to atopic dermatitis. Identification of abnormal levels of specific yeast species in the stool is an important diagnostic step in therapeutic planning for the patient with chronic gastrointestinal and extra-gastrointestinal symptoms. Antimicrobial susceptibility testing to prescription and natural agents is also performed for appropriate fungal species.

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